STRIDE-DB

Repeat Length	AFR	AMR	EUR	EAS	SAS	Repeat
15.3	320	226	345	469	529	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
6.3	5	0	0	0	0	CTGCCTGCTGCTGCTGCTG
7.3	0	0	0	0	1	CTGCCTGCTGCTGCTGCTGCTG
8.3	0	0	0	0	1	CTGCCTGCTGCTGCTGCTGCTGCTG
9.3	29	3	0	0	0	CTGCCTGCTGCTGCTGCTGCTGCTGCTG
10.3	0	0	1	1	0	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTG
11.3	0	0	2	1	0	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
12.3	4	7	22	8	0	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
13.3	34	0	1	1	4	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
13.7	0	0	2	0	0	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
14.3	164	15	23	15	21	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
14.7	0	0	2	0	0	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
16.0	1	0	0	0	0	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTG
16.3	124	55	61	108	87	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGC
17.0	0	0	0	1	0	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGCTG
17.3	143	74	174	45	235	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGCTGC
18.3	80	12	33	12	16	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGCTGCTGC
19.3	56	2	1	1	1	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGCTGCTGCTGC
20.3	19	0	1	0	2	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGCTGCTGCTGCTGC
21.3	4	0	0	0	0	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGCTGCTGCTGCTGCTGC
23.3	2	0	0	0	0	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGCTGCTGCTGCTGCTGCTGCTGC
25.3	0	0	0	0	1	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
26.3	1	0	0	0	0	CTGCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC

Position	Disease/Trait	P-value	SNPs	Location with respect to STR	distance	Study
16:87602251	Depression severity x hours spent watching television interaction,	1.0E-7	rs149149942	downstream	-35639	Associations between electronic devices use and common mental traits: A gene-environment interaction model using the UK Biobank data.
16:87604761	Post bronchodilator FEV1/FVC ratio in smoking,	3.0E-6	rs862225	downstream	-33129	Genome-wide association study of lung function and clinical implication in heavy smokers.
16:87615821	Post bronchodilator FEV1/FVC ratio in COPD,	1.0E-6	rs73251207	downstream	-22069	A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
16:87642741	Gamma glutamyl transferase levels in excessive alcohol consumption,	7.0E-7	rs146846403	upstream	4851	Biomarker and genomic risk factors for liver function test abnormality in hazardous drinkers.
16:87668472	Dementia with Lewy bodies,	8.0E-6	rs7206657	upstream	30582	Susceptibility to neurofibrillary tangles: role of the PTPRD locus and limited pleiotropy with other neuropathologies.
16:87671419	Osteoarthritis (self-reported),	2.0E-6	rs864839	upstream	33529	Genome-wide analyses using UK Biobank data provide insights into the genetic architecture of osteoarthritis.
16:87671419	Hippocampal volume in mild cognitive impairment,	8.0E-7	rs864839	upstream	33529	Genome-wide association study of Alzheimer's disease endophenotypes at prediagnosis stages.
16:87674431	Height,	3.0E-7	rs79613350	upstream	36541	Whole-Genome Sequencing Coupled to Imputation Discovers Genetic Signals for Anthropometric Traits.
16:87677763	Treponema D abundance in stool,	2.0E-9	rs76960347	upstream	39873	Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort.
16:87677763	Treponemataceae abundance in stool,	6.0E-9	rs76960347	upstream	39873	Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort.
16:87678441	Idiopathic dilated cardiomyopathy,	8.0E-6	rs8051448	upstream	40551	A Genome-Wide Association Study of Idiopathic Dilated Cardiomyopathy in African Americans.
16:87678576	Bipolar disorder (body mass index interaction),	5.0E-6	rs34975147	upstream	40686	Genome-wide association study of bipolar disorder accounting for effect of body mass index identifies a new risk allele in TCF7L2.
16:87687268	Late-onset Alzheimer's disease,	3.0E-6	rs117760708	upstream	49378	Two novel loci, COBL and SLC10A2, for Alzheimer's disease in African Americans.

Position	HGVS	dbSNP id	Phenotype List	Distance	Clinvar Significance
16:87597243	GRCh37/hg19 16q24.2(chr16:87597243-87657494)x1	NA	not provided	-40647	Uncertain significance
16:87597944	GRCh38/hg38 16q24.2(chr16:87597944-87682294)x1	NA	See cases	-39946	Uncertain significance
16:87604288	NM_001271604.4(JPH3):c.431CWG(40_?)	NA	Huntington disease-like 2	-33602	Pathogenic
16:87631550	GRCh38/hg38 16q24.2(chr16:87597944-87682294)x1	NA	See cases	-6340	Uncertain significance
16:87631550	GRCh38/hg38 16q24.2(chr16:87597944-87682294)x1	NA	See cases	-6340	Uncertain significance
16:87636753	NC_000016.9:g.(?_87636753)_(88505740_?)del	NA	Hyperammonemic encephalopathy due to carbonic anhydrase VA deficiency	-1137	Pathogenic
16:87636753	NC_000016.9:g.(?_87636753)_(89723996_?)dup	NA	Mucopolysaccharidosis, MPS-IV-A	-1137	Uncertain significance
16:87636872	NM_020655.4(JPH3):c.120C>A (p.Thr40=)	rs777929426	not provided	-1018	Likely benign
16:87637019	NM_020655.4(JPH3):c.267C>T (p.His89=)	rs142674980	not provided	-871	Likely benign
16:87637894	NM_001271604.4(JPH3):c.431CWG(40_?)	NA	Huntington disease-like 2	4	Pathogenic
16:87637894	NM_001271604.4(JPH3):c.431CWG(40_?)	NA	Huntington disease-like 2	4	Pathogenic
16:87662098	GRCh37/hg19 16q24.2(chr16:87662098-88059562)x3	NA	not provided	24208	Uncertain significance
16:87662122	GRCh37/hg19 16q24.2(chr16:87662122-87849968)x1	NA	not provided	24232	Uncertain significance
16:87667835	GRCh37/hg19 16q24.2(chr16:87667835-87696272)x3	NA	not provided	29945	Benign
16:87669407	GRCh37/hg19 16q24.2(chr16:87669407-88114637)x3	NA	not provided	31517	Benign
16:87677877	NM_020655.4(JPH3):c.396C>A (p.Gly132=)	rs1597257024	not provided	39987	Likely benign
16:87677886	NM_020655.4(JPH3):c.405C>T (p.Val135=)	rs79690276	not provided	39996	Benign
16:87677887	NM_020655.4(JPH3):c.406G>A (p.Gly136Ser)	NA	not provided	39997	Likely benign
16:87677988	NM_020655.4(JPH3):c.507C>T (p.Ser169=)	rs35224773	not provided	40098	Benign
16:87678006	NM_020655.4(JPH3):c.525G>A (p.Thr175=)	rs35305520	not provided	40116	Benign
16:87678018	NM_020655.4(JPH3):c.537C>T (p.Pro179=)	rs149948089	not provided	40128	Benign
16:87678038	NM_020655.4(JPH3):c.557C>A (p.Ala186Asp)	rs142120839	not provided	40148	Likely benign
16:87678076	NM_020655.4(JPH3):c.595G>A (p.Val199Met)	rs9934067	not provided	40186	Benign
16:87678093	NM_020655.4(JPH3):c.612C>T (p.Ser204=)	rs143432868	not provided	40203	Benign
16:87678107	NM_020655.4(JPH3):c.626G>C (p.Ser209Thr)	rs144296512	not provided\|Huntington disease-like 2	40217	Conflicting interpretations of pathogenicity
16:87678135	NM_020655.4(JPH3):c.654G>A (p.Ser218=)	rs199789251	not provided	40245	Likely benign
16:87678219	NM_020655.4(JPH3):c.738C>T (p.Ser246=)	rs34442559	not provided	40329	Benign
16:87678237	NM_020655.4(JPH3):c.756C>T (p.Thr252=)	rs148709536	not provided	40347	Benign
16:87678294	NM_020655.4(JPH3):c.813C>T (p.Ala271=)	rs140676785	not provided	40404	Benign
16:87678324	NM_020655.4(JPH3):c.843C>T (p.Asp281=)	rs61737926	not provided	40434	Benign
16:87678351	NM_020655.4(JPH3):c.870C>T (p.Gly290=)	rs144950183	not provided	40461	Likely benign
16:87678378	NM_020655.4(JPH3):c.897C>T (p.Gly299=)	rs144628082	not provided	40488	Likely benign
16:87678402	NM_020655.4(JPH3):c.921C>T (p.Asp307=)	rs35304352	not provided	40512	Benign
16:87678414	NM_020655.4(JPH3):c.933C>T (p.Tyr311=)	rs368992633	not provided	40524	Likely benign
16:87678420	NM_020655.4(JPH3):c.939C>T (p.Gly313=)	rs144601410	not provided	40530	Benign
16:87678436	NM_020655.4(JPH3):c.955C>T (p.Arg319Trp)	rs148131421	Huntington disease-like 2	40546	Uncertain significance
16:87678436	NM_020655.4(JPH3):c.955C>A (p.Arg319=)	rs148131421	not provided	40546	Benign
16:87678471	NM_020655.4(JPH3):c.990C>T (p.Asp330=)	rs34200070	not provided	40581	Benign
16:87678513	NM_020655.4(JPH3):c.1032C>T (p.Val344=)	rs8051490	not provided	40623	Benign
16:87678514	NM_020655.4(JPH3):c.1033G>A (p.Gly345Ser)	rs144550250	not provided	40624	Likely benign
16:87678579	NM_020655.4(JPH3):c.1098C>T (p.Ala366=)	rs202066813	not provided	40689	Likely benign
16:87678580	NM_020655.4(JPH3):c.1099G>A (p.Val367Ile)	rs147884034	not provided	40690	Likely benign
16:87678589	NM_020655.4(JPH3):c.1108G>A (p.Ala370Thr)	rs200608117	not provided	40699	Likely benign
16:87678609	NM_020655.4(JPH3):c.1128C>T (p.Ile376=)	rs111568864	not provided	40719	Benign
16:87678633	NM_020655.4(JPH3):c.1152G>A (p.Ala384=)	rs376541804	not provided	40743	Likely benign
16:87685469	GRCh37/hg19 16q24.2(chr16:87685469-87867191)x1	NA	not provided	47579	Uncertain significance
16:87687199	GRCh37/hg19 16q24.2-24.3(chr16:87687199-89304429)x3	NA	See cases	49309	Uncertain significance
16:87687199	GRCh37/hg19 16q24.2-24.3(chr16:87687199-89304429)x3	NA	See cases	49309	Uncertain significance

No Alu found near the repeat

Conservation score was not calculated

Position	Population	BlockLength (kb)	Distance	Location with respect to STR	No. of SNPs	SNPs in the Haploblock
16:87588708-87606821	EAS	18.114	-49182	downstream	40	rs11859964, rs2334209, rs72808126, rs4843629, rs4843630, rs9925615, rs12598476, rs8053559, rs140038195, rs9972797, rs11648544, rs7185762, rs11648916, rs9673851, rs111210105, rs111210106, rs71920026, rs12931935, rs111067827, rs147322263, rs111164422, rs111164423, rs57882866, rs62650871, rs111218330, rs111064100, rs72808143, rs142500790, rs8056477, rs8056356, rs72808149, rs2562070, rs4462595, rs12373083, rs5818636, rs3909525, rs79309728, rs12446100, rs862224, rs86483,
16:87589190-87592647	all_pop	3.458	-48700	downstream	5	rs2334208, rs2334209, rs72808126, rs58397774, rs484362,
16:87589568-87593599	AFR	4.032	-48322	downstream	7	rs111671259, rs7191622, rs58397774, rs13337316, rs4843629, rs3896608, rs484363,
16:87593599-87597481	all_pop	3.883	-44291	downstream	10	rs4843630, rs9925615, rs12598476, rs8053559, rs9972797, rs11648544, rs7185762, rs146003338, rs11648916, rs6205648,
16:87594781-87597479	AFR	2.699	-43109	downstream	8	rs9925615, rs8053559, rs9972797, rs79418456, rs7201256, rs11648544, rs7185762, rs1164891,
16:87594781-87597503	AMR	2.723	-43109	downstream	12	rs9925615, rs12598476, rs8053559, rs140038195, rs9972797, rs17772016, rs11648544, rs7185762, rs146003338, rs11648916, rs62056481, rs967385,
16:87594781-87597581	SAS	2.801	-43109	downstream	9	rs9925615, rs12598476, rs8053559, rs9972797, rs11648544, rs7185762, rs11648916, rs9673851, rs11121010,
16:87597503-87597581	all_pop	0.079	-40387	downstream	2	rs9673851, rs11121010,
16:87597589-87598165	EUR	0.577	-40301	downstream	13	rs111210106, rs71920026, rs12931935, rs111067827, rs367840126, rs147322263, rs111164422, rs111164423, rs57882866, rs62650871, rs111218330, rs111064100, rs7280814,
16:87597597-87597639	AFR	0.043	-40293	downstream	3	rs71920026, rs12931935, rs1293194,
16:87597597-87597608	all_pop	0.012	-40293	downstream	2	rs71920026, rs1293193,
16:87597597-87597608	AMR	0.012	-40293	downstream	2	rs71920026, rs1293193,
16:87597597-87597608	SAS	0.012	-40293	downstream	2	rs71920026, rs1293193,
16:87597704-87600463	AMR	2.76	-40186	downstream	15	rs111067827, rs147322263, rs111164422, rs111164423, rs57882866, rs62650871, rs111218330, rs111064100, rs72808143, rs142500790, rs72808145, rs8056477, rs62056485, rs8056356, rs7280814,
16:87597704-87600377	SAS	2.674	-40186	downstream	12	rs111067827, rs147322263, rs111164422, rs111164423, rs57882866, rs62650871, rs111218330, rs111064100, rs72808143, rs142500790, rs8056477, rs805635,
16:87597755-87598033	AFR	0.279	-40135	downstream	8	rs147322263, rs111164422, rs111164423, rs57882866, rs62650871, rs111172453, rs111210108, rs11106410,
16:87597755-87598165	all_pop	0.411	-40135	downstream	8	rs147322263, rs111164422, rs111164423, rs57882866, rs62650871, rs111218330, rs111064100, rs7280814,
16:87598168-87598274	AFR	0.107	-39722	downstream	3	rs563226719, rs530314867, rs14250079,
16:87598168-87598274	all_pop	0.107	-39722	downstream	3	rs563226719, rs530314867, rs14250079,
16:87598574-87602069	EUR	3.496	-39316	downstream	10	rs72808145, rs8056477, rs62056485, rs8056356, rs72808149, rs16943046, rs111751761, rs57980571, rs2562070, rs446259,
16:87598855-87600355	AFR	1.501	-39035	downstream	5	rs2254732, rs113758527, rs8056477, rs2562069, rs2858392,
16:87598855-87600210	all_pop	1.356	-39035	downstream	3	rs2254732, rs8056477, rs6205648,
16:87600463-87600717	all_pop	0.255	-37427	downstream	2	rs72808149, rs1694304,
16:87601451-87601704	AMR	0.254	-36439	downstream	2	rs111751761, rs5798057,
16:87601453-87602902	AFR	1.45	-36437	downstream	10	rs8063516, rs57980571, rs140488786, rs2562070, rs4462595, rs62056487, rs66511720, rs12373083, rs56175737, rs11381603,
16:87601704-87601878	all_pop	0.175	-36186	downstream	2	rs57980571, rs256207,
16:87601878-87602069	SAS	0.192	-36012	downstream	2	rs2562070, rs446259,
16:87602069-87602697	all_pop	0.629	-35821	downstream	4	rs4462595, rs62056487, rs12373083, rs5617573,
16:87602069-87602697	AMR	0.629	-35821	downstream	4	rs4462595, rs62056487, rs12373083, rs5617573,
16:87602489-87604791	EUR	2.303	-35401	downstream	10	rs12373083, rs56175737, rs77329536, rs5818636, rs58586255, rs3909525, rs16943052, rs72808156, rs862225, rs7930972,
16:87603471-87604398	AFR	0.928	-34419	downstream	5	rs5818636, rs58586255, rs3909525, rs9938992, rs254463,
16:87603471-87604198	all_pop	0.728	-34419	downstream	4	rs5818636, rs58586255, rs3909525, rs1694305,
16:87603471-87606800	AMR	3.33	-34419	downstream	11	rs5818636, rs58586255, rs3909525, rs16943052, rs72808156, rs79309728, rs17772034, rs72808161, rs62056489, rs12446100, rs86222,
16:87603471-87604791	SAS	1.321	-34419	downstream	3	rs5818636, rs3909525, rs7930972,
16:87604761-87604791	all_pop	0.031	-33129	downstream	2	rs862225, rs7930972,
16:87605383-87606800	all_pop	1.418	-32507	downstream	6	rs17772034, rs72808161, rs825575, rs62056489, rs12446100, rs86222,
16:87605383-87606800	EUR	1.418	-32507	downstream	5	rs17772034, rs72808161, rs62056489, rs12446100, rs86222,
16:87605383-87606634	SAS	1.252	-32507	downstream	2	rs17772034, rs6205648,
16:87606443-87606800	AFR	0.358	-31447	downstream	6	rs13334110, rs825574, rs62056489, rs12446100, rs825573, rs86222,
16:87606663-87606800	SAS	0.138	-31227	downstream	2	rs12446100, rs86222,